RNAJunction Database - Junction Profile:242
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 242: 1FFK_j2_0-C774_0-U866

Primary Citation: (from PDB entry 1FFK)

N.BAN P.NISSEN J.HANSEN P.B.MOORE T.A.STEITZ THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT AT 2.4 A RESOLUTION SCIENCE V. 289 905 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQ6 j2 0-C774 0-U866 
NC-IUBMB Classification:HS5HS20Cluster Page
Angles: 138°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.74632Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: UGUAGGGGUGAAAGGCCCAUCGAGUC 26nt

Strand 2: Chain 0: GACGAUCUACG 11nt

Valid XHTML 1.0 Transitional