RNAJunction Database - Junction Profile:2440
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2440: 1KC8_j2_A-C774_A-U866

Primary Citation: (from PDB entry 1KC8)

J.L.HANSEN N.BAN P.NISSEN P.B.MOORE T.A.STEITZ STRUCTURES OF FIVE ANTIBIOTICS BOUND AT THE PEPTIDYL TRANSFERASE CENTER OF THE LARGE RIBOSOMAL SUBUNIT J.MOL.BIOL. V. 330 1061 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1VQ6 j2 0-C774 0-U866 
NC-IUBMB Classification:HS5HS20Cluster Page
Angles: 138°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.70075Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGUAGGGGUGAAAGGCCCAUCGAGUC 26nt

Strand 2: Chain A: GACGAUCUACG 11nt

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