RNAJunction Database - Junction Profile:293
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 293: 1FFK_j2_9-G86_9-C95

Primary Citation: (from PDB entry 1FFK)

N.BAN P.NISSEN J.HANSEN P.B.MOORE T.A.STEITZ THE COMPLETE ATOMIC STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT AT 2.4 A RESOLUTION SCIENCE V. 289 905 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

Click to launch 3D viewer Jmol | Larger 3D image | Created with Raster3D and RNAView

Derived Information
Type:Bulge LoopCluster:1VQK j2 9-G3086 9-C3095 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 146°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.63376Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 9: GAGUGCG 7nt

Strand 2: Chain 9: AGCCUC 6nt

Valid XHTML 1.0 Transitional