RNAJunction Database - Junction Profile:3645
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 3645: 1NJM_j2_0-C1221_0-G1246

Primary Citation: (from PDB entry 1NJM)

A.BASHAN I.AGMON R.ZARIVATCH F.SCHLUENZEN J.M.HARMS R.BERISIO H.BARTELS H.A.HANSEN A.YONATH STRUCTURAL BASIS OF THE RIBOSOMAL MACHINERY FOR PEPTIDE BOND FORMATION, TRANSLOCATION, AND NASCENT CHAIN PROGRESSION MOL. CELL V. 11 91 2003

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1PNY j2 0-C1221 0-G1246 
NC-IUBMB Classification:HS4HS7Cluster Page
Angles: 35°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.36827Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain 0: CGCGGAGAAGCCA 13nt

Strand 2: Chain 0: UGGUGGAGCC 10nt

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