RNAJunction Database - Junction Profile:5554
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 5554: 1S1H_j3_A-U672_A-C717_A-C732

Primary Citation: (from PDB entry 1S1H)

C.M.SPAHN M.G.GOMEZ-LORENZO R.A.GRASSUCCI R.JORGENSEN G.R.ANDERSEN R.BECKMANN P.A.PENCZEK J.P.G.BALLESTA J.FRANK DOMAIN MOVEMENTS OF ELONGATION FACTOR EEF2 AND THE EUKARYOTIC 80S RIBOSOME FACILITATE TRNA TRANSLOCATION. EMBO J. V. 23 1008 2004

Experimental Method: ELECTRON_MICROSCOPY

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:3-wayCluster:1HNX j3 A-U672 A-C717 A-C732 
NC-IUBMB Classification:Cluster Page
Angles: 30:157:162°
Fit Criteria: B
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.77503Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: AACGCCGAUGGCG 13nt

Strand 2: Chain A: GGUGGA 6nt

Strand 3: Chain A: GGCAGCC 7nt

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