RNAJunction Database - Junction Profile:643
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 643: 1HNX_j2_A-C1407_A-A1493

Primary Citation: (from PDB entry 1HNX)

D.E.BRODERSEN W.M.CLEMONS JR. A.P.CARTER R.MORGAN-WARREN B.T.WIMBERLY V.RAMAKRISHNAN THE STRUCTURAL BASIS FOR THE ACTION OF THE ANTIBIOTICS TETRACYCLINE, PACTAMYCIN, AND HYGROMYCIN B ON THE 30S RIBOSOMAL SUBUNIT CELL (CAMBRIDGE,MASS.) V. 103 1143 2000

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1HNW j2 A-C1407 A-A1493 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 151°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 1.08426Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UCACG 5nt

Strand 2: Chain A: AAGU 4nt

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