############# Start of Description of junction: j1 # Number of strands: NUM_STRANDS = 2 LILLEY = 2HS1 FINGERPRINT = 147 LOOP_LENGTH_SUM = 1 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 4 S1_NAME_ID3 = 10 S1_NUM_ID5_ORIG = 4 S1_NUM_ID3_ORIG = 10 S1_NAME2_ID5 = 6 S1_NAME2_ID3 = 8 S1_NUM2_ID5_ORIG = 6 S1_NUM2_ID3_ORIG = 8 S1_SQ2 = UUC S1_SQLEN2 = 3 S1_SQ = AGUUCGG S1_SQLEN = 7 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 19 S2_NAME_ID3 = 24 S2_NUM_ID5_ORIG = 19 S2_NUM_ID3_ORIG = 24 S2_NAME2_ID5 = 21 S2_NAME2_ID3 = 22 S2_NUM2_ID5_ORIG = 21 S2_NUM2_ID3_ORIG = 22 S2_SQ2 = GG S2_SQLEN2 = 2 S2_SQ = CCGGCU S2_SQLEN = 6 S2_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 6 H1_INID2 = 3 H1_OUTID2 = 4 H1_INID2_ORIG = 6 H1_OUTID2_ORIG = 22 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 6.834825865248419 H1_P_Y = 22.232866222203864 H1_P_Z = 6.411816523531816 # Orientation: H1_DX_X = -0.9073777607813449 H1_DX_Y = 0.30608313153229716 H1_DX_Z = 0.28806026423443853 H1_DY_X = 0.36113816087861217 H1_DY_Y = 0.2170980443266295 H1_DY_Z = 0.906889005284973 H1_DZ_X = 0.2150461066763274 H1_DZ_Y = 0.9269204689405335 H1_DZ_Z = -0.30752823652864514 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 7 H2_INID2 = 3 H2_OUTID2 = 5 H2_INID2_ORIG = 21 H2_OUTID2_ORIG = 8 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 6.571524888090752 H2_P_Y = 6.075180422163372 H2_P_Z = 15.381774390393389 # Orientation: H2_DX_X = -0.5367665885113224 H2_DX_Y = -0.5690133455663204 H2_DX_Z = -0.6229810928313473 H2_DY_X = 0.7821802810205059 H2_DY_Y = -0.058746905385840265 H2_DY_Z = -0.6202763973345036 H2_DZ_X = 0.31634733670539994 H2_DZ_Y = -0.8202271719926184 H2_DZ_Z = 0.476604394529037 ############# END of Description of junction: j1