#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 175
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  2
S1_NAME_ID3 = 8
S1_NUM_ID5_ORIG =  2
S1_NUM_ID3_ORIG = 8
S1_NAME2_ID5 =  4
S1_NAME2_ID3 = 6
S1_NUM2_ID5_ORIG =  4
S1_NUM2_ID3_ORIG = 6
S1_SQ2 = UAA
S1_SQLEN2 = 3
S1_SQ = ACUAACG
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  7
S2_NAME_ID3 = 12
S2_NUM_ID5_ORIG =  7
S2_NUM_ID3_ORIG = 12
S2_NAME2_ID5 =  9
S2_NAME2_ID3 = 10
S2_NUM2_ID5_ORIG =  9
S2_NUM2_ID3_ORIG = 10
S2_SQ2 = UA
S2_SQLEN2 = 2
S2_SQ = CGUAGU
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 4
H1_OUTID2_ORIG = 10
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = -6.985548032199291
H1_P_Y = -2.336421483590069
H1_P_Z = 2.634067677850977
# Orientation:
H1_DX_X = -0.9326925917352167
H1_DX_Y = -0.3580772074084795
H1_DX_Z = 0.04318845744860145
H1_DY_X = -0.36003546179282075
H1_DY_Y = 0.931459463262986
H1_DY_Z = -0.05251413666299731
H1_DZ_X = -0.021424181988477287
H1_DZ_Y = -0.06452892244857455
H1_DZ_Z = -0.9976858336138434
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 9
H2_OUTID2_ORIG = 6
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -6.657963807814761
H2_P_Y = -0.4012429860549238
H2_P_Z = 19.587910848493298
# Orientation:
H2_DX_X = 0.15297944601792057
H2_DX_Y = -0.982583506651137
H2_DX_Z = 0.10548431899199429
H2_DY_X = 0.9847633178348785
H2_DY_Y = 0.14263989012790113
H2_DY_Z = -0.09947396438838751
H2_DZ_X = 0.08269520507799655
H2_DZ_Y = 0.11909455991545104
H2_DZ_Z = 0.989433165431425
#############  END of Description of junction: j1