#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = 2HS1
FINGERPRINT = 167
LOOP_LENGTH_SUM = 1
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  5
S1_NAME_ID3 = 11
S1_NUM_ID5_ORIG =  5
S1_NUM_ID3_ORIG = 11
S1_NAME2_ID5 =  7
S1_NAME2_ID3 = 9
S1_NUM2_ID5_ORIG =  7
S1_NUM2_ID3_ORIG = 9
S1_SQ2 = GAG
S1_SQLEN2 = 3
S1_SQ = CUGAGGU
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  14
S2_NAME_ID3 = 19
S2_NUM_ID5_ORIG =  14
S2_NUM_ID3_ORIG = 19
S2_NAME2_ID5 =  16
S2_NAME2_ID3 = 17
S2_NUM2_ID5_ORIG =  16
S2_NUM2_ID3_ORIG = 17
S2_SQ2 = AC
S2_SQLEN2 = 2
S2_SQ = ACACAG
S2_SQLEN = 6
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 6
H1_INID2 = 3
H1_OUTID2 = 4
H1_INID2_ORIG = 7
H1_OUTID2_ORIG = 17
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 83.85465572264906
H1_P_Y = 14.998446367430939
H1_P_Z = 19.781620522264138
# Orientation:
H1_DX_X = 0.02399368848574568
H1_DX_Y = -0.4508371010978234
H1_DX_Z = -0.8922837055480493
H1_DY_X = -0.006841589314518615
H1_DY_Y = 0.8924457082800146
H1_DY_Z = -0.4511029266456106
H1_DZ_X = 0.9996886993301928
H1_DZ_Y = 0.0169282617623292
H1_DZ_Z = 0.01832862202145691
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 16
H2_OUTID2_ORIG = 9
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 65.76179084600354
H2_P_Y = 13.026338611699959
H2_P_Z = 18.89585786909359
# Orientation:
H2_DX_X = 0.2148501057524328
H2_DX_Y = -0.9168956513306341
H2_DX_Z = 0.3363655699222825
H2_DY_X = 0.05136580596784768
H2_DY_Y = 0.35454036871649386
H2_DY_Z = 0.9336287704048374
H2_DZ_X = -0.975295332725139
H2_DZ_Y = -0.18331255145609937
H2_DZ_Z = 0.12327011983125402
#############  END of Description of junction: j1