############# Start of Description of junction: j9 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS20 FINGERPRINT = 137 LOOP_LENGTH_SUM = 25 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 864 S1_NAME_ID3 = 889 S1_NUM_ID5_ORIG = 864 S1_NUM_ID3_ORIG = 889 S1_NAME2_ID5 = 866 S1_NAME2_ID3 = 887 S1_NUM2_ID5_ORIG = 866 S1_NUM2_ID3_ORIG = 887 S1_SQ2 = UAGGGGUGAAAGGCCCAUCGAG S1_SQLEN2 = 22 S1_SQ = UGUAGGGGUGAAAGGCCCAUCGAGUC S1_SQLEN = 26 S1_CHAR = 0 ## Properties of strand 2 S2_NAME_ID5 = 772 S2_NAME_ID3 = 782 S2_NUM_ID5_ORIG = 772 S2_NUM_ID3_ORIG = 782 S2_NAME2_ID5 = 774 S2_NAME2_ID3 = 780 S2_NUM2_ID5_ORIG = 774 S2_NUM2_ID3_ORIG = 780 S2_SQ2 = CGAUCUA S2_SQLEN2 = 7 S2_SQ = GACGAUCUACG S2_SQLEN = 11 S2_CHAR = 0 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 11 H1_INID2 = 3 H1_OUTID2 = 9 H1_INID2_ORIG = 866 H1_OUTID2_ORIG = 780 H1_INSEQ_CHAR = 0 H1_OUTSEQ_CHAR = 0 # Position: H1_P_X = 91.41211025328667 H1_P_Y = 147.82309510054418 H1_P_Z = 67.12547507701501 # Orientation: H1_DX_X = 0.7054961061970602 H1_DX_Y = -0.7063878175295315 H1_DX_Z = -0.057371555553615394 H1_DY_X = 0.20040216655809218 H1_DY_Y = 0.27648544087332994 H1_DY_Z = -0.9398908301626818 H1_DZ_X = 0.6797898320654809 H1_DZ_Y = 0.6515919368983418 H1_DZ_Z = 0.3366210510194776 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 26 H2_INID2 = 3 H2_OUTID2 = 24 H2_INID2_ORIG = 774 H2_OUTID2_ORIG = 887 H2_INSEQ_CHAR = 0 H2_OUTSEQ_CHAR = 0 # Position: H2_P_X = 72.25291735878825 H2_P_Y = 126.07171663598332 H2_P_Z = 62.106937052372906 # Orientation: H2_DX_X = -0.35684658070375974 H2_DX_Y = 0.9331651046020824 H2_DX_Z = 0.04316717958160865 H2_DY_X = -0.2990792102756217 H2_DY_Y = -0.07034782872439393 H2_DY_Z = -0.9516316561436327 H2_DZ_X = -0.8849927365921957 H2_DZ_Y = -0.35249690856340976 H2_DZ_Z = 0.3041936646813994 ############# END of Description of junction: j9