#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS5
FINGERPRINT = 53
LOOP_LENGTH_SUM = 7
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  26
S1_NAME_ID3 = 36
S1_NUM_ID5_ORIG =  26
S1_NUM_ID3_ORIG = 36
S1_NAME2_ID5 =  28
S1_NAME2_ID3 = 34
S1_NUM2_ID5_ORIG =  28
S1_NUM2_ID3_ORIG = 34
S1_SQ2 = GAUCGAG
S1_SQLEN2 = 7
S1_SQ = ACGAUCGAGGG
S1_SQLEN = 11
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  15
S2_NAME_ID3 = 22
S2_NUM_ID5_ORIG =  15
S2_NUM_ID3_ORIG = 22
S2_NAME2_ID5 =  17
S2_NAME2_ID3 = 20
S2_NUM2_ID5_ORIG =  17
S2_NUM2_ID3_ORIG = 20
S2_SQ2 = ACGC
S2_SQLEN2 = 4
S2_SQ = CCACGCGG
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 28
H1_OUTID2_ORIG = 20
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 30.78688457827321
H1_P_Y = 31.141132610499174
H1_P_Z = 63.983874430121084
# Orientation:
H1_DX_X = 0.7362383169645987
H1_DX_Y = 0.12267121452492802
H1_DX_Z = -0.6655110170088179
H1_DY_X = 0.5690567117431726
H1_DY_Y = 0.4199960206077904
H1_DY_Z = 0.7069496456563726
H1_DZ_X = 0.3662343504549739
H1_DZ_Y = -0.8991969282646615
H1_DZ_Z = 0.2394102853810196
## Properties of helix 2
H2_INID = 1
H2_OUTID = 11
H2_INID2 = 3
H2_OUTID2 = 9
H2_INID2_ORIG = 17
H2_OUTID2_ORIG = 34
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 44.74379042495329
H2_P_Y = 35.49147726209425
H2_P_Z = 47.91696298034238
# Orientation:
H2_DX_X = -0.4156327539859106
H2_DX_Y = -0.7509288598375718
H2_DX_Z = -0.5131815090951122
H2_DY_X = 0.023371698598545265
H2_DY_Y = 0.5552214178142805
H2_DY_Z = -0.8313741281185756
H2_DZ_X = 0.909232191202392
H2_DZ_Y = -0.3575402420194749
H2_DZ_Z = -0.21321772397703853
#############  END of Description of junction: j1