#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 5
LILLEY = 3HS2HS8HS7
FINGERPRINT = 32:55:77:77:106:107:112:117:119:173
LOOP_LENGTH_SUM = 17
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  101
S1_NAME_ID3 = 114
S1_NUM_ID5_ORIG =  101
S1_NUM_ID3_ORIG = 114
S1_NAME2_ID5 =  103
S1_NAME2_ID3 = 112
S1_NUM2_ID5_ORIG =  103
S1_NUM2_ID3_ORIG = 112
S1_SQ2 = UGGCGGACGG
S1_SQLEN2 = 10
S1_SQ = AGUGGCGGACGGGU
S1_SQLEN = 14
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  56
S2_NAME_ID3 = 68
S2_NUM_ID5_ORIG =  56
S2_NUM_ID3_ORIG = 68
S2_NAME2_ID5 =  58
S2_NAME2_ID3 = 66
S2_NUM2_ID5_ORIG =  58
S2_NUM2_ID3_ORIG = 66
S2_SQ2 = CAAGUCGAA
S2_SQLEN2 = 9
S2_SQ = UGCAAGUCGAACG
S2_SQLEN = 13
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  313
S3_NAME_ID3 = 318
S3_NUM_ID5_ORIG =  313
S3_NUM_ID3_ORIG = 318
S3_NAME2_ID5 =  315
S3_NAME2_ID3 = 316
S3_NUM2_ID5_ORIG =  315
S3_NUM2_ID3_ORIG = 316
S3_SQ2 = AC
S3_SQLEN2 = 2
S3_SQ = ACACUG
S3_SQLEN = 6
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  335
S4_NAME_ID3 = 340
S4_NUM_ID5_ORIG =  335
S4_NUM_ID3_ORIG = 340
S4_NAME2_ID5 =  337
S4_NAME2_ID3 = 338
S4_NUM2_ID5_ORIG =  337
S4_NUM2_ID3_ORIG = 338
S4_SQ2 = GA
S4_SQLEN2 = 2
S4_SQ = CAGACU
S4_SQLEN = 6
S4_CHAR = A
## Properties of strand 5
S5_NAME_ID5 =  349
S5_NAME_ID3 = 356
S5_NUM_ID5_ORIG =  349
S5_NUM_ID3_ORIG = 356
S5_NAME2_ID5 =  351
S5_NAME2_ID3 = 354
S5_NUM2_ID5_ORIG =  351
S5_NUM2_ID3_ORIG = 354
S5_SQ2 = GCAG
S5_SQLEN2 = 4
S5_SQ = AGGCAGCA
S5_SQLEN = 8
S5_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 13
H1_INID2 = 3
H1_OUTID2 = 11
H1_INID2_ORIG = 103
H1_OUTID2_ORIG = 66
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = -4.497569541941206
H1_P_Y = 105.28140381522046
H1_P_Z = -39.684087615134615
# Orientation:
H1_DX_X = 0.9962559697137778
H1_DX_Y = 0.08183697167172
H1_DX_Z = -0.027870286637615038
H1_DY_X = 0.0631274515114102
H1_DY_Y = -0.9088849353397705
H1_DY_Z = -0.41224155440482235
H1_DZ_X = -0.05906748407826701
H1_DZ_Y = 0.4089387293715703
H1_DZ_Z = -0.9106482020762101
## Properties of helix 2
H2_INID = 1
H2_OUTID = 14
H2_INID2 = 3
H2_OUTID2 = 12
H2_INID2_ORIG = 315
H2_OUTID2_ORIG = 112
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = -24.29355755270717
H2_P_Y = 80.18460599286546
H2_P_Z = -9.384907572486874
# Orientation:
H2_DX_X = -0.1264325191208613
H2_DX_Y = -0.6736115331955119
H2_DX_Z = -0.7281911290689713
H2_DY_X = 0.5339123088368787
H2_DY_Y = -0.664892188373841
H2_DY_Z = 0.522356223579207
H2_DZ_X = -0.836033770000487
H2_DZ_Y = -0.3227473937701717
H2_DZ_Z = 0.4437134832674552
## Properties of helix 3
H3_INID = 1
H3_OUTID = 6
H3_INID2 = 3
H3_OUTID2 = 4
H3_INID2_ORIG = 337
H3_OUTID2_ORIG = 316
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = -4.913942453577511
H3_P_Y = 73.5108989138856
H3_P_Z = -19.07129513004828
# Orientation:
H3_DX_X = -0.28911996630674697
H3_DX_Y = -0.7720535653258764
H3_DX_Z = 0.5659884604392538
H3_DY_X = 0.9528982688505829
H3_DY_Y = -0.17551693931378054
H3_DY_Z = 0.24734327004282974
H3_DZ_X = -0.0916216912327048
H3_DZ_Y = 0.6108413020429566
H3_DZ_Z = 0.7864339574396055
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 351
H4_OUTID2_ORIG = 338
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = -2.655102760269104
H4_P_Y = 63.88499045726681
H4_P_Z = -33.93639511045652
# Orientation:
H4_DX_X = -0.9858182725638245
H4_DX_Y = -0.16701110426028976
H4_DX_Z = 0.01642024765448724
H4_DY_X = -0.15148000807146333
H4_DY_Y = 0.8434721855944076
H4_DY_Z = -0.5153721755035434
H4_DZ_X = 0.07222285395874106
H4_DZ_Y = -0.5105506470296035
H4_DZ_Z = -0.8568091363796881
## Properties of helix 5
H5_INID = 1
H5_OUTID = 8
H5_INID2 = 3
H5_OUTID2 = 6
H5_INID2_ORIG = 58
H5_OUTID2_ORIG = 354
H5_INSEQ_CHAR = A
H5_OUTSEQ_CHAR = A
# Position:
H5_P_X = -22.675411417449954
H5_P_Y = 71.5694570820603
H5_P_Z = -29.524709970544343
# Orientation:
H5_DX_X = -0.7424022799846597
H5_DX_Y = 0.6683302502334101
H5_DX_Z = -0.046621146452306306
H5_DY_X = -0.046277704558342236
H5_DY_Y = -0.12058011205473917
H5_DY_Z = -0.9916243293897544
H5_DZ_X = -0.6683541192619273
H5_DZ_Y = -0.7340266433855192
H5_DZ_Z = 0.12044773997794422
#############  END of Description of junction: j1