RNAJunction Database - Junction Profile:21
Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 21: 1BYJ_j2_A-A7_A-G19

Primary Citation: (from PDB entry 1BYJ)

S.YOSHIZAWA D.FOURMY J.D.PUGLISI STRUCTURAL ORIGINS OF GENTAMICIN ANTIBIOTIC ACTION EMBO J. V. 17 6437 1998

Experimental Method:

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:Bulge LoopCluster:1BYJ j2 A-A7 A-G19 
NC-IUBMB Classification:2HS1Cluster Page
Angles: 162°
Fit Criteria: C
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.71797Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: UGAAG 5nt

Strand 2: Chain A: CACA 4nt

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